Plant MITE

SE2710169

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_3502
Setaria italica
SE2710169
Tc1/Mariner
St3
scaffold_8:28038861-28039011
TA
TACTCCCTCCGTTCCAAACTGTAGGTCGTTTTGGCTTTTCTAATTTCATAGATATTATTATGCATCTAGATATAGTGTATGTCTAGATGCATAATAATATCTATGAACCTATAAAAGTCAAAACGACCTACAATTTGGAACGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

                  C                    C  AT                              G
TACTCCCTCCGTTCCAAA TGTAGGTCGTTTTGGCTTTT TA  TTCATAGATATTATTATGCATCTAGATATA 
|||||||||||||||||| |||||||||||||||||||| ||  |||||||||||||||||||||||||||||| T
ATGAGGGAGGCAAGGTTT ACATCCAGCAAAACTGAAAA AT  AAGTATCTATAATAATACGTAGATCTGTAT 
                  A                    T  CC                              G

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2710169

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2710169