SE2750190

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3523
  • Setaria italica
  • SE2750190
  • PIF/harbinger
  • To11
  • scaffold_9:55794723-55794847
  • AGT
  • TGGGCCTGTTCGCTTCAGCTTATAAGCCGGCT

Secondary structure and sequence

TSD    TIR
5'



3' 
AG                       -A        GAAA    --G      C  A   G  GT
  TGGGCCTGTTCGCTTCAGCTTAT  AGCCGGCT    AGCT   AAACGG TG TTT TT  
  |||||||||||||||||||||||  ||||||||    ||||   |||||| || ||| ||  G
  ACCCGGACAAGCGAAGTCGAATA  TCGGCCGA    TCGG   TTTGTC AC AAA GA  
TG                       AG        ATAG    TGG      -  A   G  GA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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