Plant MITE

SE2710208

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_3541
Setaria italica
SE2710208
Tc1/Mariner
St23
scaffold_1:11145507-11145601
TA
TACTCCCTCCGTCCCTTATTATTTGTCGCTCGGGAAGCGGGTTT

Secondary structure and sequence

TSD TIR

5'

3'

         C       A         G  C       G -    GTG
TACTCCCTC GTCCCTT TTATTTGTC CT GGGAAGC G GTTT   
||||||||| ||||||| ||||||||| || ||||||| | ||||   A
ATGAGGGAG CAGGGAA AATAGACAG GA TCTTTTG C CAAA   
         A       A         A  -       G A    GGG

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2710208

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2710208