SE2710210

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3543
  • Setaria italica
  • SE2710210
  • Tc1/Mariner
  • St13
  • scaffold_8:2482612-2482717
  • TA
  • TACTACCTCCATCCTTAAATATATGATGTTTAGGACAAGCTAGTTAGTTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
    A     ATC                  A        T          AA
TACT CCTCC   CTTAAATATATGATGTTT GGACAAGC AGTTAGTTCA  
|||| |||||   |||||||||||||||||| |||||||| ||||||||||   
ATGA GGAGG   GAATTTATATACTGCAAA CCTGTTCG TTAATCAAGT  
    G     CAA                  C        T          AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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