SE2710236

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3569
  • Setaria italica
  • SE2710236
  • Tc1/Mariner
  • St2
  • scaffold_9:9949265-9949524
  • TA
  • TACTCCCTCCGTTTTTATTTATAAGGCG

Secondary structure and sequence

TSD    TIR
5'



3' 
              TTA           CACACACATATCAAGATTCAAACT    AATCTTTGACCAATAATTTGATTATTATTTTTTTATTTTATAATGTAATCTTTATATGGTTGGATTTGTAATCAAATACACTC
TACTCCCTCCGTTT   TTTATAAGGCG                        TTCC                                                                                   
||||||||||||||   |||||||||||                        ||||                                                                                    
ATGAGGGAGGTAGA   AAATATTCCGT                        CTGA                                                                                   
              TAC           ------------------ACCATA    ACCGTGTCAGAAGGTTTATTGTGAAACTGGTAAGTAAATAGAATATAATATAACAAATACCAATATTTGAATATTAGTAACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3