SE2710286

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3619
  • Setaria italica
  • SE2710286
  • Tc1/Mariner
  • St3
  • scaffold_1:19138594-19138750
  • TA
  • TACTCCCTCCGTTCCAAATTGTAGGTCGTTTTAGCTTTTTTAGGTTCATATAGATATTATTATGCATAATAATA

Secondary structure and sequence

TSD    TIR
5'



3' 
                                                TA                 -------A      AT
TACTCCCTCCGTTCCAAATTGTAGGTCGTTTTAGCTTTTTTAGGTTCA  TAGATATTATTATGCAT        ATAATA  
||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||        ||||||   
ATGAGGGAGGCAAGGTTTAACATCTAGCAAAATCGAAAAAATCTAAGT  ATCTATAATAATACGTA        TATTAT  
                                                --                 GATCTGTA      AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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