SE2710307

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3640
  • Setaria italica
  • SE2710307
  • Tc1/Mariner
  • St3
  • scaffold_6:31969918-31970069
  • TA
  • TACTCCCTCCGTTCCAAAATGTAGGTCGTTTTAGCTTTTCTAGATGCATAGATTTTGCTATGCACCTAAATATA

Secondary structure and sequence

TSD    TIR
5'



3' 
         C   C                  AGC               G           CAC   A     GT
TACTCCCTC GTT CAAAATGTAGGTCGTTTT   TTTTCTAGATGCATA ATTTTGCTATG   CTA ATATA  
||||||||| ||| ||||||||||||||||||   ||||||||||||||| |||||||||||   ||| |||||   
ATGAGGGAG CAA GTTTTACATCCAGCAAAA   AAAAGATTTATGTAT TAAAACGATAC   GAT TGTAT  
         A   A                  CTA               A           ATA   C     TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3