SE2750310

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3643
  • Setaria italica
  • SE2750310
  • PIF/harbinger
  • To45
  • scaffold_7:23730646-23730884
  • TTA
  • AGGGTGTGTTTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                -     - C ACATGATGCATGCATGGATGATCCTGGATGGGGTGGTTCAACCAATTTGCTTGTACCATATGGTTCACTCTAATTAGTAGAATAATGTATTAA
  AGGGTGTGTTTGGTTG CATGC A C                                                                                             
  |||||||||||||||| ||||| | |                                                                                              
  TCCCACACAAACCAAC AACAT G T                                                                                             
AT                C     A - AAACTAAGTACATACTTTACTAAGTTTTATTATTACTAGAAAAACAAACCAACCCACTTAACCTGGTTGAGTAGGTCCTACTCCGGTAGGGTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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