SE2710329

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3662
  • Setaria italica
  • SE2710329
  • Tc1/Mariner
  • St3
  • scaffold_7:14329783-14329923
  • TA
  • TACTCCCTCCGTCCCAAATTGTAGGTCGTTTTAGCTTTTTTAGGTGTATAGATTTTGCTATGCACCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
            C                   A            G       -    C      CC  TT
TACTCCCTCCGT CCAAATTGTAGGTCGTTTT GCTTTTTTAGGT TATAGAT TTTG TATGCA  TA  
|||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||| ||||||  ||  G
ATGAGGGAGGCA GGTTTAACATCTAGCAAAA TGAAAAGATCCA GTATCTA AAAC ATACGT  AT  
            A                   C            A       C    -      AC  CT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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