Plant MITE

SE2710330

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_3663
Setaria italica
SE2710330
Tc1/Mariner
St3
scaffold_9:55840330-55840480
TA
TACTCCCTCCGTTCCAAATTGTAGGTCATTTTAGCTTTTTTAGATTCATAGATATTATTATGCATCTAGATATAGTGTATGTCTAATTGCATAATAATATCTATGAACCTAGAAAAGTCAAAACGACCTACAATTTGGAACGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

                           A    A          A                    TC        G
TACTCCCTCCGTTCCAAATTGTAGGTC TTTT GCTTTTTTAG TTCATAGATATTATTATGCA  TAGATATA 
||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||  |||||||| T
ATGAGGGAGGCAAGGTTTAACATCCAG AAAA TGAAAAGATC AAGTATCTATAATAATACGT  ATCTGTAT 
                           C    C          C                    TA        G

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2710330

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2710330