SE2710335

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3668
  • Setaria italica
  • SE2710335
  • Tc1/Mariner
  • St5
  • scaffold_3:22252293-22252442
  • TA
  • TACTCCCTCCGTCCCAAATTACTATTCGTTTTAGCTTTTCTAGATACATAGCTTTTGCTACGTATCTGGACAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                                A                           C T       C  AC
TACTCCCTCCGTCCCAAATTACTATTCGTTTT GCTTTTCTAGATACATAGCTTTTGCTA G ATCTGGA AT  
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| ||   
ATGAGGGAGGCAGGGTTTAATGATAAGCAAAA TGAAAAGATCTATGTATCGAAAACGAT C TGGATCT TA  
                                C                           A T       A  TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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