SE2710358

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3691
  • Setaria italica
  • SE2710358
  • Tc1/Mariner
  • St31
  • scaffold_7:6571766-6571898
  • TA
  • TACTCCCTCCGTTTCAAATTATAGGTCGTTTTAGTTTTTCTAGGTTTACATGTGTTTGTATGC

Secondary structure and sequence

TSD    TIR
5'



3' 
         C                      A               CAT            ATT
TACTCCCTC GTTTCAAATTATAGGTCGTTTT GTTTTTCTAGGTTTA   GTGTTTGTATGC   
||||||||| |||||||||||||||||||||| |||||||||||||||   ||||||||||||   A
ATGAGGGAG CAGGGTTTAATATCCAGTAAAA CGAAAAGATCCAAGT   CACAAACATACG   
         A                      C               ATC            CAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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