SE2710364

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3697
  • Setaria italica
  • SE2710364
  • Tc1/Mariner
  • St2
  • scaffold_3:7635034-7635294
  • TA
  • TACTCCCTCCGTTCCTGTTTATAAGGCG

Secondary structure and sequence

TSD    TIR
5'



3' 
                            CACACACATATCAAGATTCAAA   TCCAATCTTTGACCAATAATTTAGCCAACATTTTTTTTATTTTGTAATGTAAATTTGACATGGTTGGATTTGTAATCAAATGTACTC
TACTCCCTCCGTTCCTGTTTATAAGGCG                      GTT                                                                                       
||||||||||||||||||||||||||||                      |||                                                                                       T
ATGAGGGAGGCAAGGACAAATATTCCGC                      CAC                                                                                       
                            --------------------AC   ACTGTACCGTGCCAGAGGATTTTATCTGAAACTGGTAAATAAATAGAATATAATATAACAAATACCAATATTTGAATATCAGTAACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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