Plant MITE

SE2710369

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_3702
Setaria italica
SE2710369
Tc1/Mariner
St3
scaffold_2:28168195-28168345
TA
TACTCCCTCCGTCACAAATTACTATTCGTTTTGGCTTTTCTAGATACATAGTTTTTGTTATGCACCTAGATATATACTATGTCTAGATACGTAGCAAGAGCTATGTACCTAGAAAAGCCAAAACGAATAGTAATTTGGGACGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

             A                             A                  CAC         T
TACTCCCTCCGTC CAAATTACTATTCGTTTTGGCTTTTCTAG TACATAGTTTTTGTTATG   CTAGATATA 
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||| A
ATGAGGGAGGCAG GTTTAATGATAAGCAAAACCGAAAAGATC ATGTATCGAGAACGATGC   GATCTGTAT 
             G                             C                  ATA         C

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2710369

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2710369