SE2710399

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3732
  • Setaria italica
  • SE2710399
  • Tc1/Mariner
  • St3
  • scaffold_6:2183098-2183213
  • TA
  • TACTCCCTCCGT

Secondary structure and sequence

TSD    TIR
5'



3' 
            TCTGT            A       A          -----      CATA
TACTCCCTCCGT     TCCAAATTGTAG TCGTTTT GCTTTTTTAG     TAGATG    
||||||||||||     |||||||||||| ||||||| ||||||||||     ||||||     
ATGAGGGAGGCA     AGGTTTAACATC AGCAAAA CGAAAAGATC     ATCTAT    
            -----            C       C          CAAGT      AATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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