SE2750416

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3749
  • Setaria italica
  • SE2750416
  • PIF/harbinger
  • To52
  • scaffold_2:35917165-35917305
  • TTA
  • AGGGCCTGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TT     C      CTTCGA     -    AATTTGCCTGGCGCAGGCAGCGATCTCAGGGGTCCAATTTCG
  AGGGC TGTTTG      GTCTT GCCA                                          
  ||||| ||||||      ||||| ||||                                          G
  TCCCG ACAAAC      CGACG ACGG                                          
AT     A      ---CTA     G    TCCGTCGAACAGTCGGGTCCGTCGTCGCGGTCGGTGTCCGCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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