Plant MITE

SE2710430

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_3763
Setaria italica
SE2710430
Tc1/Mariner
St3
scaffold_3:25896151-25896301
TA
TACTCCCTCCGTTCCAAATTGTAGGTCGTTTTGACATTTCTAGATACATAATTTTTGCTATGTATTTAGACATAGAGTATATCTTAATGCATAGCAAAAGCTATGAACCTAGAGAAGCCAAAACGACCTACAATTTGGAACGGAGGGAGTA

Secondary structure and sequence

TSD TIR

5'

3'

                                 A A       ATA    A               T   C   G
TACTCCCTCCGTTCCAAATTGTAGGTCGTTTTG C TTTCTAG   CATA TTTTTGCTATGTATT AGA ATA 
||||||||||||||||||||||||||||||||| | |||||||   |||| ||||||||||||||| ||| ||| A
ATGAGGGAGGCAAGGTTTAACATCCAGCAAAAC G AGAGATC   GTAT GAAAACGATACGTAA TCT TAT 
                                 C A       CAA    C               T   A   G

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2710430

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2710430