SE2750437

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3770
  • Setaria italica
  • SE2750437
  • PIF/harbinger
  • To39
  • scaffold_1:7967470-7967593
  • TAA
  • AGGCCTTGTTTGGATACTAGTGGATTGAAGTGGAATGGGAGGGATTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   C            CTA T      -   T        A        AGAG     TAG
  AGG CTTGTTTGGATA   G GGATTG AAG GGAATGGG GGGATTGG    GAAAT   
  ||| ||||||||||||   | |||||| ||| |||||||| ||||||||    |||||    
  TCC GAACAAACCTAT   C CCTAAC TTC CCTTACTT CCCTAACT    TTTTA   
AA   C            CTC T      C   -        C        CAGA     CTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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