SE2710450

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3783
  • Setaria italica
  • SE2710450
  • Tc1/Mariner
  • St3
  • scaffold_6:29240317-29240464
  • TA
  • TACTCCCTCCGTCCCAAATTGTAGGTCATTTTGGCATTTATAGATTCATAAATTTTACTATGTATCTAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
                           A           A       A  A    TA             CATG
TACTCCCTCCGTCCCAAATTGTAGGTC TTTTGGCATTT TAGATTC TA ATTT  CTATGTATCTAGA    
||||||||||||||||||||||||||| ||||||||||| ||||||| || ||||  |||||||||||||     
ATGAGGGAGGCAGGGTTTAACATCCAG AAAACCGTAAA ATCTAAG AT TAAA  GATACGTGGATCT    
                           C           G       A  C    AG             ATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3