SE2710455

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3788
  • Setaria italica
  • SE2710455
  • Tc1/Mariner
  • St3
  • scaffold_5:26789018-26789169
  • TA
  • TACTCCCTCCGTTTCAAAATGTAGGTCGTTTTGGTTTTTCTAGGTACATAGATTTTGCTATGTATCTAGACATA

Secondary structure and sequence

TSD    TIR
5'



3' 
                                                             G        C   AC
TACTCCCTCCGTTTCAAAATGTAGGTCGTTTTGGTTTTTCTAGGTACATAGATTTTGCTAT TATCTAGA ATA  
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||   
ATGAGGGAGGCAAGGTTTTACATCCAGCAAAATCGAAAAGATCTATGTATCTAAAACGATA GTGGATTT TAT  
                                                             G        A   CC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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