SE2710457

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3790
  • Setaria italica
  • SE2710457
  • Tc1/Mariner
  • St3
  • scaffold_5:43929388-43929540
  • TA
  • TACTCCCTCCGTTTTCAAAATGTAGGTCGTTTTGGCTTTTCGAGGTACATATATTTTGCTTTGTATCTAGACATA

Secondary structure and sequence

TSD    TIR
5'



3' 
              T                          G         T        T          C   AC
TACTCCCTCCGTTT CAAAATGTAGGTCGTTTTGGCTTTTC AGGTACATA ATTTTGCT TGTATCTAGA ATA  
|||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||| |||||||||| |||   
ATGAGGGAGGCAAG GTTTTACGTCCAGCAAAACCGAAAAG TCTATGTAT TAAAACGA ACGTGGATCT TAT  
              -                          A         C        T          A   TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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