SE2750504

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3837
  • Setaria italica
  • SE2750504
  • PIF/harbinger
  • To60
  • scaffold_1:12708841-12708996
  • TAA
  • AGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
TA    ACCT         -AAG   GAGCAAAACCCAGGGATGGAAAAACTCCCACTAAGAACTAAGATGATAATTA
  AGGC    TTTGGAAGC    GGG                                                    
  ||||    |||||||||    |||                                                    A
  TCCG    AAACCTTTG    TAG                                                    
AA    GATT         AGGT   GAAGACTCTAGGGTTTGAAAAGTAACCCATCCATTAGGTACCCTTATATTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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