SE2710508

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3841
  • Setaria italica
  • SE2710508
  • Tc1/Mariner
  • St2
  • scaffold_3:38063509-38063769
  • TA
  • TACTCCCTCCATTTTTATTTATAAGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
              TTA          --  ACACGCATATCAAGATTCAAACTTTGCAATCTTTGACCAATAATTTGACTATTTATTTTTTATTTTTATAATGTAAACTTTATATGGTTGAATTTGTAAT
TACTCCCTCCATTT   TTTATAAGGC  GC                                                                                                    
||||||||||||||   ||||||||||  ||                                                                                                    C
ATGAGGGAGGTAGA   AAATATTCCG  TC                                                                                                    
              TAC          TA  ATACTGAACCGTGCTAGAAGGTTTATTGTGAAACTGATAAGTAAATGGAGTATAATATAACAAATACCAATATTTGAATATTAGTAACATCTCATATAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3