SE2750524

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3857
  • Setaria italica
  • SE2750524
  • PIF/harbinger
  • To67
  • scaffold_8:34526921-34527051
  • AAA
  • GGGGGTGTTCGGGTGAGCTTCAAATAAGTTTTAGCCACTTATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAA   G          G    TC        -----------        -   A   GAATAGTAGAAAT
   GGG GTGTTCGGGT AGCT  AAATAAGT           TTTAGCCA CTT TTT             
   ||| |||||||||| ||||  ||||||||           |||||||| ||| |||              
   CCC TACAAGTTTA TCGG  TTTATTCG           AAGTCGGT GAA AAA             
AAA   G          G    -T        CCATTGCCGAT        C   A   AAATGAAGAGAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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