SE2750552

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3885
  • Setaria italica
  • SE2750552
  • PIF/harbinger
  • To23
  • scaffold_9:5625564-5625761
  • TAA
  • AGGCCCCCTTTGGCACGGCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA      C             CATCCCAAAAC      - CCGGTGAAGCCAAAGCCGGTGAGCCAAAAAAACTGGCTTCACCCGGCTTCTAGTTCATTTT
  AGGCCC CTTTGGCACGGCT           GGCTTC A                                                             
  |||||| |||||||||||||           |||||| |                                                             A
  TCCGGG GAAACCGTGCCGA           GCCGAA C                                                             
AA      A             ------ATAAA      A CGAAGTAGATAAAGTGCGTTTAGCTCTGTGACATCGCACTTCGGCAAAACATTCGGCCCTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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