SE2750556

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3889
  • Setaria italica
  • SE2750556
  • PIF/harbinger
  • To69
  • scaffold_9:11357577-11357793
  • TAA
  • AGGGCGTCTCCAATGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA                 ATAA     CTAATAGCTCATAGTTGATGTGGTCCTATGTACAAAGCAGCTTTGAAGATCGTGTTGTGAGAGAGTGTTGCATCGAAAAGTG
  AGGGCGTCTCCAATGGT    GTCAG                                                                                  
  |||||||||||||||||    |||||                                                                                   
  TCCCGCAGAGGTTACTA    ATCGA                                                                                  
AA                 ---G     ATCTCGATCGAGTTAGTTAAAAAATGATCAACTTGTCACGTTATTCATGCTCTGATCGTACCTCACTTCTTGATCAGAGCGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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