SE3950002

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3900
  • Vitis vinifera
  • SE3950002
  • PIF/harbinger
  • To2
  • chr14:1962984-1963108
  • TAA
  • AGAGTGCATTTGATAGTGATTTTATGAAGTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA      CA      A      T  T         CT      TATATCACTTAGAAATTT
  AGAGTG  TTTGAT GTGATT TA GAAGTGTTT  AATTTT                  
  ||||||  |||||| |||||| || |||||||||  ||||||                  T
  TCTCAC  AAACTA CACTAA AT TTTCACAAA  TTATAA                  
AA      AC      C      C  T         TA      AAATTATAAACTTCCTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3