SE3950005

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3903
  • Vitis vinifera
  • SE3950005
  • PIF/harbinger
  • To2
  • chr14:24857861-24857985
  • TAA
  • AGAGTGCATTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TA  A    A    ACAA                  C  AC        C        ATTT
  AG GTGC TTTG    TGATTTTAGAAAGTGTTT TA  TTTTCTAA ACTTGAAA    
  || |||| ||||    |||||||||||||||||| ||  |||||||| ||||||||    T
  TC CATG AAAC    ACTAAAATCTTTCACAAA AT  AAAAGATT TGAACTTT    
AA  C    C    CATC                  A  CA        A        CTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3