SE3950009

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3907
  • Vitis vinifera
  • SE3950009
  • PIF/harbinger
  • To2
  • chr6:13583158-13583282
  • TTA
  • AGAGTGTGTTTAATAGTGATTATAGAAAGTGTTTTTAGTTTTTCTAACACTTGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT            A        A     A          TT   C   CAC      ATTT
  AGAGTGTGTTTA TAGTGATT TAGAA GTGTTTTTAG  TTT TAA   TTGAAA    
  |||||||||||| |||||||| ||||| ||||||||||  ||| |||   ||||||    T
  TCTCACACAAAT ATCACTAA ATCTT CATAAAGATT  AAA ATT   AACTTT    
AT            C        A     C          GT   A   ATA      CTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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