SE3950015

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3913
  • Vitis vinifera
  • SE3950015
  • PIF/harbinger
  • To3
  • chr19:16795781-16795905
  • TAA
  • AGAGTTTGTTTAGTAGTAATTTTAGGAAGTGTCTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA     T     A -    A              C    ACA      ACATTTAAAAAATTT
  AGAGT TGTTT G TAGT ATTTTAGGAAGTGT TCTA   TTTTTA               
  ||||| ||||| | |||| |||||||||||||| ||||   ||||||               T
  TCTCA ACAAA C GTTA TAAAATCCTTTACA AGAT   AGAAAG               
AA     C     - T    C              A    --C      ATTATGAACTTTCTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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