SE3950019

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3917
  • Vitis vinifera
  • SE3950019
  • PIF/harbinger
  • To2
  • chr15:16399400-16399524
  • TTA
  • AGAGTGTGTTTAATAGTGATTTTAGGAAGTGTTTTTAACCTTTTTAATACTTGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT  A        AA           G             CC            -    GGTA
  AG GTGTGTTT  TAGTGATTTTA GAAGTGTTTTTAA  TTTTTAATACTT GAAA    
  || ||||||||  ||||||||||| |||||||||||||  |||||||||||| ||||     
  TC CACGCAAA  GTCACTAAGAT CTTCGCAAAGATT  AAAAATTGTGAA TTTT    
AT  C        CC           A             AT            A    AAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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