SE3950020

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3918
  • Vitis vinifera
  • SE3950020
  • PIF/harbinger
  • To6
  • chr14:1030388-1030512
  • TTA
  • TAGAGTGTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
T    GTG     GACA              C        CA            --     AT
 TAGA   TGTTT    GTGATTTTAGAAAA GTTTTTAA  TTTTTAATACTT  AAATT  
 ||||   |||||    |||||||||||||| ||||||||  ||||||||||||  |||||  A
 ATCT   GCAGA    CACTAAAATCTTTT TAAAAATT  AAAAATTGTGAA  TTTAA  
A    ATG     ATAC              A        TA            AT     AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3