SE3950025

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3923
  • Vitis vinifera
  • SE3950025
  • PIF/harbinger
  • To3
  • chr4:10797647-10797771
  • TTA
  • AGAGTGCATTTGATAGTGATTCTTAGAAGTGTTTTTAATATTTTTAATACTTGAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT      CA             C      -         ATA         C      AATA
  AGAGTG  TTTGATAGTGATT TTAGAA GTGTTTTTA   TTTTTAATA TTGAAA    
  ||||||  ||||||||||||| |||||| |||||||||   ||||||||| ||||||    A
  TCTCAC  AAACTATCATTAA AATCTT CACAAAAAT   AAAAATTAT AATTTT    
AT      AC             -      T         CAG         A      AAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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