SE3950026

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3924
  • Vitis vinifera
  • SE3950026
  • PIF/harbinger
  • To7
  • chr19:3410175-3410299
  • TTA
  • AGAGTGCGTTTGGGAGTTATTCTAGAAAGTATTTCTAACATTTTTAATATTTAAATGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT     G       G   T   C   A    A   C   C    T        A  T  TA
  AGAGT CGTTTGG AGT ATT TAG AAGT TTT TAA ATTT TAATATTT AA GA  
  ||||| ||||||| ||| ||| ||| |||| ||| ||| |||| |||||||| || ||  A
  TCTCA GCAAACT TCA TAA ATC TTCG GAA ATT TAAA ATTATAAA TT TT  
AT     G       A   C   A   C    C   A   A    T        C  T  TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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