SE3950034

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3932
  • Vitis vinifera
  • SE3950034
  • PIF/harbinger
  • To3
  • chr14:21339711-21339837
  • TTA
  • AGTGTGTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAG          ACAA         A       C     TT                AATT
    AGTGTGTTTG    TGATTTTAG AAGTGTT TTAAT  TTTTTAATACTTAAAA    
    ||||||||||    ||||||||| ||||||| |||||  ||||||||||||||||    T
    TCATACAAAC    ACTAAAATC TTCGCAA GATTA  AAAGATTATGAATTTT    
ATTA          CACC         C       A     -T                CTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3