SE3950052

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3950
  • Vitis vinifera
  • SE3950052
  • PIF/harbinger
  • To3
  • chr9:13174489-13174613
  • TAA
  • AGAGTCCGTTTGGTAGTGATTCGAAAAAACATTTTTAATATTTTTAATATTTGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA     CC      T        GAA   A A      A                 AATTT
  AGAGT  GTTTGG AGTGATTC   AAA C TTTTTA TATTTTTAATATTTGAA     
  |||||  |||||| ||||||||   ||| | |||||| |||||||||||||||||     T
  TCTCA  CAAACC TCATTAAG   TTT G AAAGAT ATAAAAATTATGAACTT     
AA     CA      C        ATC   C C      C                 AATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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