SE3950071

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_3969
  • Vitis vinifera
  • SE3950071
  • PIF/harbinger
  • To3
  • chr1:19258935-19259059
  • TAA
  • AGAGTGTGTTTAGTAGTGATTTTAGGAAGTGTTTCTAGAATTTTTAAGACTTGAAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA           A                          AA       G     -     TT
  AGAGTGTGTTT GTAGTGATTTTAGGAAGTGTTTCTAG  TTTTTAA ACTTG AAAAT  
  ||||||||||| ||||||||||||||||||||||||||  ||||||| ||||| |||||   
  TCTCACACAAA CATCACTAAAATCTTTCACAAAGATT  AAAGATT TGAAT TTTTA  
AA           G                          GA       A     G     TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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