SE1920001

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4044
  • Lotus japonicus
  • SE1920001
  • Mutator
  • M1
  • CM0826:164872-165057
  • ATTATTAAG
  • AGGGTTAAGGGTCATATTAGTCCTTGTGTTTGTAAAAGTGTTTGATTTTGGTTCCTTAGCCAAAAAATGACGATTAGTGGCGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTATTA                                                           CC       GA  A        G  TTT
       AGGGTTAAGGGTCATATTAGTCCTTGTGTTTGTAAAAGTGTTTGATTTTGGTTCCTTAG  AAAAAAT  CG TTAGTGGC GT   
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  || |||||||| ||   T
       TCCCAATTCCCAGTATAATCAGGGACACAAACATTTTTGCAAACTAAAACCAGGGAGTC  TTTTTTA  GC AATCATTG CA   
ATTATTA                                                           AT       --  -        A  TTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3