SE1930010

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4053
  • Lotus japonicus
  • SE1930010
  • hAT
  • Hat6
  • CM0041:335016-335215
  • CTAGACTC
  • CTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
        ACTC              C     -    GACCATCGCGTTGAGCCAAAAATCCGCTATTTCGGCCGCTATTTGGCGACAAATAGCGGAAATAGCG
    CTAG    CAGTGTTATCAAAT GCGAT CGCG                                                                   
    ||||    |||||||||||||| ||||| ||||                                                                   T
    GATC    GTCACAATAGTTTA TGCTA TATC                                                                   
CTCA    ----              T     A    GCCGCGATAGGGCGATATCGCATCGCCTAAAAACCGATTAGCGCTGCGGCGATAACGGGCGATATCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3