SE1910034

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4077
  • Lotus japonicus
  • SE1910034
  • Tc1/Mariner
  • St5
  • LjT42A12:114911-115064
  • TA
  • TACACCCTCCGGTCACATATATAAGCAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
                             AAAAA                                         GTA
TACACCCTCCGGTCACATATATAAGCAAA     AAACATTTTAGGTTCATTCATTTAATGAATGTATCTAGTCA   
|||||||||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||   T
ATGTGGGAGGCCAGTGTATATATTCGTTT     TTTGTAAAATCTAAGTAAGTAAATTACTTGCATAGATCAGT   
                             ---CA                                         AAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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