SE1950041

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4084
  • Lotus japonicus
  • SE1950041
  • PIF/harbinger
  • To5
  • CM0013:525526-525660
  • TTA
  • TAGGGCATGTTTGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
T    -  A        ACA    TGAGGAGCAGTGGAAACGTGCGTTGGGGGAGAAGCTATAACTTAG
 TAGG GC TGTTTGGG   GCTG                                             
 |||| || ||||||||   ||||                                             A
 ATTC CG ACAAACCC   CCCG                                             
     A  G        --A    CAACCTCCGGGGTTTGCATGCAACGGTTGCGACTTTTGTCCTGCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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