SE1920065

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4108
  • Lotus japonicus
  • SE1920065
  • Mutator
  • M17
  • CM0416:810748-810941
  • TATTCTACC
  • T

Secondary structure and sequence

TSD    TIR
5'



3'
   -   TACCCGAATAATGTTATGTTTACAAACCATTTCCACCTCCACCTTACTTAAAGAAGAAGAGAAATGAGAGAAATGAGTGATATGATTTGTG
 TA TTC                                                                                           
 || |||                                                                                            
 CC TCT                                                                                           
C  A   TATCTCATTACTATATATGTGTGGAGTGAAAGAGAAGGTAGAGTAAAGGTGTGTAAAAAGAAGAAAAGAGAGAGACGTAAAGAATAGTGTA

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End