SE1930083

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4126
  • Lotus japonicus
  • SE1930083
  • hAT
  • Hat22
  • CM0237:113537-113748
  • CTTATTCT
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
   CTTA   --  AT     ---- ATGTACCGCCTGGCCATCCTGGGCCTGTGCCCAGGCTCTGGCCAAAAAAAAAAATTTTTCTTTGGTCCAGATCATAATTTAGGTC
       TTC  TC  AGGCG    G                                                                                     
       |||  ||  |||||    |                                                                                     C
       CGT  CC  GCCTT    T                                                                                     
TCTTATT   CA  --     GGTC TTAAAACCCTTCGGACCCGTGTAAATACTTCATCAGGGACTTAAAAAGGGAATGGAAATGTAAAAGGGAAAAAATAAAAAAAAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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