SE1950097

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4140
  • Lotus japonicus
  • SE1950097
  • PIF/harbinger
  • To11
  • CM0071:617771-617927
  • TTA
  • AGGCTTTGTTTGGTTGGAGGGGAGGAAAGAGGGAAGGAAAGAAAACACGGAATTCGAGGTGTGAATTTAGATTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                            GA                                            AG
  AGGCTTTGTTTGGTTGGAGGGGAGGAAA  GGGAAGGAAAGAAAACACGGAATTCGAGGTGTGAATTTAGATTA  
  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||  G
  TCCGAAACAAACCAACCTCCCTTCCTTT  TTCTTCCTTTCTTTTGTGCCTTAAGCTCCACACTTAAATCTGAT  
AT                            AC                                            GT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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