SE1920161

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4204
  • Lotus japonicus
  • SE1920161
  • Mutator
  • M21
  • CM0269:103347-103555
  • ATTTTTTAA
  • GAG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTTTTTAA   AAAAAG                     CGGTGTAA                               C   A      ----     TCTCTCTTTTCA
         GAG      TTTGATGCACCGACGGTGTAA        AGTTTTTTTACACCGTCAACCAATCAGATTT AAG ATGTGA    GAAAA            
         |||      |||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||| ||||||    |||||            T
         CTC      AAACTACGTGGCTGCCACATT        TCAAAAAAATGTGGCAGTTGGTTAGTCTAAA TTC TACACT    AGTTA            
AATTTTTTA   AAATTA                     --------                               A   C      GTAC     ATTTCTTTAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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