SE1920163

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4206
  • Lotus japonicus
  • SE1920163
  • Mutator
  • M5
  • LjSGA_006089:578-777
  • TATACCTTA
  • TAGAGATTAATTTCTATGCACCGACGGTGTAAATAAGTTTTACACCATCATTTAATCACATCCCTCCATTTTGTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TATACCT                                 T                        CAT  C  C     G ----   CTCATA     TTTT
       TAGAGATTAATTTCTATGCACCGACGGTGTAAA AAGTTTTACACCATCATTTAATCA   CC TC ATTTT T    TAG      ATTAA    
       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   || || ||||| |    |||      |||||     
       ATCTCTAATTAAAGATACGTGGCTGCCACATTT TTCAAAATGTGGTAGTAAGTTAGT   GG AG TAAAA A    ATC      TAATT    
ATTCCAT                                 -                        ATT  A  A     G TAAA   -TATAA     TAAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3