SE1920181

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4224
  • Lotus japonicus
  • SE1920181
  • Mutator
  • M25
  • CM0312:980793-981121
  • TAATACTTA
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
  TAATAC    - CTAAAAAGCACTTTTGGCCCCTAATGTTTCAAGTTTGTGCAAATTCTGCCCCTACTCTATTTTTGTCGATGTTTCTACCCCTCATGTTTTCAAACAGTGCATCGTCTACCCCTCATGTTTTCAAACAGTGCATTGTCTACCCCTGACGGAGG
        TTAG G                                                                                                                                                        
        |||| |                                                                                                                                                         
        CCTC T                                                                                                                                                        
GTTTACTC    G TTATTGTTAGGAGGTTGATTTGGTTTGGTTAAATTCATAATCCGATTTTTCGTAAAAACCGGGGACTACAAAATTCAAACACGTTTAAGACGGGGATAGATAAAAACAGCTACAAAGATGGGGAGTACAAAAGTTTGTCACGTGGCAGATGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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