SE1910197

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4240
  • Lotus japonicus
  • SE1910197
  • Tc1/Mariner
  • St15
  • LjSGA_056471:594-744
  • TA
  • TACTCCCTCCGGTCCTTATTACAAGAAACAATTGATTTTTTTGGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                     C        A          T    CATAGAA     A  A     TTTA   AA
TACTCCCTCCGGTCCTTATTA AAGAAACA TTGATTTTTT GGTT       TAATT AT TATTT    CTA  
||||||||||||||||||||| |||||||| |||||||||| ||||       ||||| || |||||    |||   
ATGAGGGAGGCCAGGAATAAT TTCTTTGT AACTGAAAAA CCAA       ATTAA TA ATAGA    GAT  
                     A        A          T    ATAATAC     C  C     -TCA   AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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