SE1910198

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4241
  • Lotus japonicus
  • SE1910198
  • Tc1/Mariner
  • St11
  • CM0096:496744-497061
  • TA
  • TACTCCCTCCGTTCCTATTCTTTTGTTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                AT             ---TAAC     GTCTAAATTCCAAAATTTTTGTTGTTTTATAAACCCAATGCATTTTTTCTCAATTTATTCCATATATACCCTCATTTAATACTATATCTCTCACCTACCACCTCTTATTTTCACCAA
TACTCCCTCCGTTCCT  TCTTTTGTTGTTT       TTTTG                                                                                                                     
||||||||||||||||  |||||||||||||       |||||                                                                                                                     T
ATGAGGGAGGCAAGGA  AGAAAACAACAAA       ACGTG                                                                                                                     
                CT             TTCCAAG     TAACAAATTCTCACGTTAGTAACTATATAAACAACTGTATTTGTAGGGATAAATTACATCTCAATTTCACTTCTTTCTCTTAATATCAATAACCAAATCTTTGAACAATACTAAAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3