SE1910214

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_4257
  • Lotus japonicus
  • SE1910214
  • Tc1/Mariner
  • St18
  • CM0013:1337676-1337982
  • TA
  • TACTCCCTCCGGTCCTATTTATAAGCATGAAAGAGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
                           TG        GAAAAATC     C   TTTATAAGAACCAAATGAAAGTTTGAGCTATATTAATTATTTTTTTCCAATGATGCCCTTATTAATTCTAACTTGTAAAATGTGTCTCATTAATTATTCTCTC
TACTCCCTCCGGTCCTATTTATAAGCA  AAAGAGAA        TTGGT CTT                                                                                                       
|||||||||||||||||||||||||||  ||||||||        ||||| |||                                                                                                        
ATGAGGGAGGCCAGGATAAATATTCGT  TTTTTTTT        AAGTG ATC                                                                                                       
                           TG        -------T     T   AAATTCTTTACATCAATTTGATCCATTTTACGTAATAATACAGAACTTAGTTTTATTTGAAAGTTTTAATGGGAAACAATAATTACAACCTTTCACTCTTTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3